BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H04SP1|AL428623
(812 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1304 1562 0.0
>3x_Contig1304
Length = 6732
Score = 1562 bits (786), Expect = 0.0
Identities = 806/812 (99%), Gaps = 2/812 (0%)
Strand = Plus / Minus
Query: 1 atgtgattgcagatcctaattcatcgacaataattccattatcagaaactatagatgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5762 atgtgattgcagatcctaattcatcgacaataattccattatcagaaactatagatgatg 5703
Query: 61 gtaaaaaagttcttatgggcggtaggattagtggaaaaccatggtatggagtgcaatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5702 gtaaaaaagttcttatgggcggtaggattagtggaaaaccatggtatggagtgcaatatc 5643
Query: 121 atccagaatcgtgctgttctgagcttggtgggaaattgattgcaaactttatcgaactgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5642 atccagaatcgtgctgttctgagcttggtgggaaattgattgcaaactttatcgaactgg 5583
Query: 181 caaaagactataacgaaaccactggccgtaagagcaacattatttcaaagatatatgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5582 caaaagactataacgaaaccactggccgtaagagcaacattatttcaaagatatatgaga 5523
Query: 241 atgggatagggcaacagaacactgatattgataatatgactactttgagtcgcaaaattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5522 atgggatagggcaacagaacactgatattgataatatgactactttgagtcgcaaaattg 5463
Query: 301 atagagatccgatagttccaaaaacaagtgcaaatgaaggtaaagaacccgacattgatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5462 atagagatccgatagttccaaaaacaagtgcaaatgaaggtaaagaacccgacattgatg 5403
Query: 361 ttgaagtgcactcaatggatatcactaatgaaacagacttaaccctccaattatgcgaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5402 ttgaagtgcactcaatggatatcactaatgaaacagacttaaccctccaattatgcgaat 5343
Query: 421 cctttgagcaaaataacttacctttttttctcatggcatcctcgactataaacgctaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5342 cctttgagcaaaataacttacctttttttctcatggcatcctcgactataaacgctaata 5283
Query: 481 gaggagaaatatccattattgcattaccaaattcaaagagtaaagtcttcacacattatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5282 gaggagaaatatccattattgcattaccaaattcaaagagtaaagtcttcacacattatt 5223
Query: 541 cccaattaaatragactactatacatgattggcgaccaaaaagtttgactgtcgagaaat 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5222 cccaattaaataagactactatacatgattggcgaccaaaaagtttgactgtcgagaaat 5163
Query: 601 attatgagaacttaatttccgggcaatcggatagcatcactactgttttatctgaagata 660
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5162 attatgaaaacttaatttccgggcaatcggatagcatcactactgttttatctgaagata 5103
Query: 661 ggaatagattctggggtaccatttggttccttcatgaacgacaaaagctgtccagatcaa 720
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5102 ggaatagattctggggtacca-ttggttccttcatgaacgacaaaagctgtccagatcaa 5044
Query: 721 tggccagawctttcatttattggtggttttgtcggtattcttgggtatgadatgggtcaa 780
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5043 tggccagaactttcatttattggtggttttgtcggtattcttgggtatgaaatgggtcaa 4984
Query: 781 ttcacatcaccagaatttggaagatcaactaa 812
||||||||||||| ||||||||||||||||||
Sbjct: 4983 ttcacatcaccag-atttggaagatcaactaa 4953
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6404
Number of Sequences: 1807
Number of extensions: 6404
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 812
length of database: 10,358,551
effective HSP length: 16
effective length of query: 796
effective length of database: 10,329,639
effective search space: 8222392644
effective search space used: 8222392644
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)